联合基因组研究所的FAIR数据管理.pptx

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1、Data Generation,Management,and Tracking at the JGI,Kjiersten Fagnan,CIOSept 16,2024,Todays Overview,2,JGI overviewJGI,an SC Public Reusable Research(SC PuRe)Data ResourceFindable Accessible-JGIs Data Portal and Search API Reusable-Connecting User publications to JGI identifiers,The DOE Joint Genome

2、Institute at a glance,JGI MISSION:To provide the global research community with free access to the most advanced integrative genome science capabilities in support of the DOE energy&environmental research mission,Integrative Genomics Building(IGB),U.S.Department of Energy Office of Science User Faci

3、lityJGI established in 1997,User facility from 2004Located at Lawrence Berkeley National Laboratory285 staff;$80M annual funding 2,038 Global Primary Users in FY20;10,000 Data Users,JGIs History,6/5/2026,4,What we offer,fungi,viruses,microbial communities,plants,algae,bacteria/archaea,metabolomics,D

4、NA/RNA sequencing,JGI products,DNA synthesis,Environmental genomics will enable the Bioeconomy,Genetic“Circuit”,Gene,Enzyme,Microbial Factory,DNA,FY 2020 Users:2,038 Worldwide,7,8,Primary and Secondary Users,Primary Usersare associated with one or more JGI User Program proposalsSecondary Usersbuild

5、on the work of JGI personnel and primary users through direct downstream use of JGI data,systems,and tools.,JGI User Groups,ExampleOutcomes,PublicationsPatentsSoftware AdaptationsNew TechnologiesMarketable ProductsMethods&StandardsStart-upsGrant Funding,9,JGI Outputs,Systems&Tools,Data,Discoveries&I

6、nsights,Technologies&Protocols,GeneticMaterials,JGI Data Policy,10,Sequencing projects:Data are subject to a one year embargoAt the end of the embargo period data will be made publicly available on relevant JGI portals(i.e.JGI Genome/Data Portal,MycoCosm,PhycoCosom,Phytozome,or IMG)and outside repos